BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029C11SP1|AL429044
(902 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1461 1469 0.0
3x_Contig18 228 2e-59
>3x_Contig1461
Length = 5478
Score = 1469 bits (741), Expect = 0.0
Identities = 869/905 (96%), Gaps = 5/905 (0%)
Strand = Plus / Plus
Query: 1 acatctcttccaaagggtcgagattttaagcatgtattagctctagaattaccacagata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1834 acatctcttccaaagggtcgagattttaagcatgtattagctctagaattaccacagata 1893
Query: 61 ttccatgtagtaaaggaactatcaaataaacgataactgatttaatgagccattcgcagt 120
| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 1894 t-ccatgtagtaaaggaactatcaaataaacgataactgatttaatgacccattcgca-t 1951
Query: 121 ttcactgtataaattgcttatacttagacatgcatggcttaatctttgagacaagcatat 180
|||||||||||||||||||||||||| |||||||| ||||||||||| | ||||||||||
Sbjct: 1952 ttcactgtataaattgcttatacttatacatgcattgcttaatcttttatacaagcatat 2011
Query: 181 gactactggcaggatcaaccagataactatcttatgaagcagtatccacaagtcttaaca 240
|||||| ||| ||||||||| |||| |||||||||||||||||||||||| ||||||||
Sbjct: 2012 aactactcgcaagatcaaccaaataaatatcttatgaagcagtatccacaattcttaaca 2071
Query: 241 acaaatgctgtcaagtcccgcatcaactgtcgcagatattttatcatgattagaaatgca 300
||||||||| |||| ||||||||||||| ||||| |||||||||||| |||| |||||||
Sbjct: 2072 acaaatgctctcaactcccgcatcaactttcgcatatattttatcattattataaatgca 2131
Query: 301 agtaaggaaacaagtttccatactcgcgtcggaagcaacaattcaacagtttttacacta 360
||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 2132 agtaaggaaacaattttccatactcgcttcaaaagcaacaattcaacagtttttacacta 2191
Query: 361 tcaaatcatcacaacccctccatgccatagcactctttgagtttcctctaaccgacttcc 420
||||||||||||||||||||||| |||||||||||||| | |||||||||||| ||||||
Sbjct: 2192 tcaaatcatcacaacccctccattccatagcactctttaattttcctctaaccaacttcc 2251
Query: 421 actgaacactgctccgatgtttcgcagaaacagaa-cgttcaatatcatc-ggccaaaga 478
||||||||||||||| || ||||||| |||||||| |||||||||||||| |||||||||
Sbjct: 2252 actgaacactgctccaatttttcgcaaaaacagaaacgttcaatatcatccggccaaaga 2311
Query: 479 gga-ggttacactcacagaatcacagacaaccaaagtcgcccggctattctgtaaggcat 537
||| ||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 2312 ggaaggttacactcacaaaatcacaaacaaccaaagtcgccccgctattctgtaaggcat 2371
Query: 538 tcccccaaatatggtttctttggtttggattgccattggctagtaatccaccaaatcctc 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2372 tcccccaaatatggtttctttggtttggattgccattggctagtaatccaccaaatcctc 2431
Query: 598 cactgctcgccaatggaatcgctagatgtccatgacgagactgttcaggcgtcttgcagc 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2432 cactgctcgccaatggaatcgctagatgtccatgacgagactgttcaggcgtcttgcagc 2491
Query: 658 atctttcgatgctgcacacacccatgtcaccgcgctgtatagggccccaggcttgatctg 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2492 atctttcgatgctgcacacacccatgtcaccgcgctgtatagggccccaggcttgatctg 2551
Query: 718 acgatcacctagaaactctctccaccgcgagacgaggccatagtctgttcgacgaacgac 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2552 acgatcacctagaaactctctccaccgcgagacgaggccatagtctgttcgacgaacgac 2611
Query: 778 tacatccaaatcttactcaagtttgtttccaaactctttccgattcgtcttcaactgctt 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2612 tacatccaaatcttactcaagtttgtttccaaactctttccgattcgtcttcaactgctt 2671
Query: 838 tcgcatgaagtacctcccggcctatttttctcacccgtggtcttctttctattagccctc 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2672 tcgcatgaagtacctcccggcctatttttctcacccgtggtcttctttctattagccctc 2731
Query: 898 acgtt 902
|||||
Sbjct: 2732 acgtt 2736
>3x_Contig18
Length = 1116
Score = 228 bits (115), Expect = 2e-59
Identities = 129/131 (98%), Gaps = 2/131 (1%)
Strand = Plus / Minus
Query: 1 acatctcttccaaagggtcgagattttaagcatgtattagctctagaattaccacagata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 acatctcttccaaagggtcgagattttaagcatgtattagctctagaattaccacagata 108
Query: 61 ttccatgtagtaaaggaactatcaaataaacgataactgatttaatgagccattcgcagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 107 -tccatgtagtaaaggaactatcaaataaacgataactgatttaatgagccattcgca-t 50
Query: 121 ttcactgtata 131
|||||||||||
Sbjct: 49 ttcactgtata 39
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5313
Number of Sequences: 1807
Number of extensions: 5313
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 2
length of query: 902
length of database: 10,358,551
effective HSP length: 16
effective length of query: 886
effective length of database: 10,329,639
effective search space: 9152060154
effective search space used: 9152060154
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)